json-schema

The following json-schemas are used as the format definition of the input for this task. They are the result of the Pydantic` models defined in src/aind_physiology_fip.

Download Schema

Rig Schema

AindPhysioFipRig

Complete rig configuration model for AIND FIP photometry system.
type	object
properties
aind_behavior_services_pkg_version	aind_behavior_services package version
	type	string
	pattern	^(0|[1-9]\d*)\.(0|[1-9]\d*)\.(0|[1-9]\d*)(?:-((?:0|[1-9]\d*|\d*[a-zA-Z-][0-9a-zA-Z-]*)(?:\.(?:0|[1-9]\d*|\d*[a-zA-Z-][0-9a-zA-Z-]*))*))?(?:\+([0-9a-zA-Z-]+(?:\.[0-9a-zA-Z-]+)*))?$
	default	0.12.3
version	Version
	type	string
	default	0.1.2-rc6
	const	0.1.2-rc6
computer_name	Computer Name
	Computer name
	type	string
rig_name	Rig Name
	Rig name
	type	string
camera_green_iso	G/Iso Camera
	Camera for the green and iso channels
	#/$defs/FipCamera
camera_red	Red Camera
	Red camera
	#/$defs/FipCamera
light_source_uv	UV light source
	UV (415nm) light source
	#/$defs/LightSource
light_source_blue	Blue light source
	Blue (470nm) light source
	#/$defs/LightSource
light_source_lime	Lime light source
	Lime (560nm) light source
	#/$defs/LightSource
roi_settings	Region of interest settings
	Region of interest settings. Leave empty to attempt to load from local file or manually define it in the program.
	default	null
	oneOf	#/$defs/RoiSettings
		type	null
cuttlefish_fip	CuttlefishFip
	CuttlefishFip board for controlling the trigger of cameras and light-sources
	#/$defs/HarpCuttlefishfip
networking	Networking settings
	default	zmq_publisher	connection_string	@tcp://localhost:5556
			topic	fip
		zmq_subscriber	connection_string	@tcp://localhost:5557
			topic	fip
	#/$defs/Networking