Experiment Session Notes

  • Mouse ID: 820459
  • Date: 2025-11-12
  • Experimenter: @ryan-gillis
  • Rig / Setup ID: NP1
  • Stimulus version: Openscope_P3_v52 EPHYS_SESSION3_PROD_P3_SEQUENCE
  • Protocol followed: extracellular electrophysiology
  • Notes & Issues:

| Probe | Target |

| Probe A | ACA |

| Probe B | Visa |

| Probe C | Visp |

| Probe D | Vislm |

| Probe F | ACA Mos |

- restarted all computers prior to putting the mouse on the rig
- Ryan performed the insertion, Casey was shadowing and assisting
- coated probes (5x dips) in CM-DiD
- agarose + silicone oil application went smoothly
- bleed during targeting on probe E, opted to not insert
- targeting went well on ABCDF, copied insertion location from 11/10/25 for probe D
- 5 probes inserted (ABCDF)
- settled probes for 30 minutes after reaching 3000 micron depth
- Mild eye foam appears in corner of eye at 01:12
- Foam increases at 01:23 and forms a ring around eye 
- Pupil obscured at 01:23 until 01:28, foam ring lingers until end of experiment
- Mouse walked a little, no running. Stationary most of the experiment

Data Access

  • DANDI Repository: The data from this experiment has been uploaded to the DANDI Archive and is available at: DANDI:001637/sub-820459

  • Data Format: Data is stored in Neurodata Without Borders (NWB) format.

  • Code Ocean: Raw data (unpackaged and largely unprocessed) can be accessed on Allen Institute's Code Ocean Public Collection here

  • Analysis Code: To explore the structure of the NWB file and validate its contents, you can use the intro_to_ephys_nwbs script in our repository.