Neuropixels insertions in the Allen CCF

Mouse View Brain

Interactive figure legend

Localized Neuropixels insertions are rendered within the Allen CCF 2017 brain surface. Line color identifies probe port A-F. The selected insertion is linked to its source NWB and ordered dorsal-to-tip anatomical profile. Mouse and probe selections restrict the displayed insertions; camera orientation changes the projection, not the recorded anatomical coordinates.

Probes A B C D E F

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Probe A

Mouse

Open source NWB

CCF area profile Dorsal to tip

Semi-transparent, depth-shaded oblique and dorsal projections of all localized Neuropixels insertions on the Allen CCF whole-brain surface, with 2 millimeter scale bars

Allen CCF 2017 · DANDI:001637